Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1992

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1991: 10359 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 687558 to 690393 10359 mRNA_1992: 10360 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 690779 to 693096 10360 mRNA_1993: 10361 - Hypothetical Protein, at 694051 to 694539 10361

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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690,693 + 0.2
690,715 + -1.0
691,023 - 10360 mRNA_1992 0.11 0.4
691,255 - 10360 mRNA_1992 0.21 -2.9
691,588 - 10360 mRNA_1992 0.35 -0.3
691,715 + 10360 mRNA_1992 0.40 1.4
691,730 - 10360 mRNA_1992 0.41 -0.5
691,851 + 10360 mRNA_1992 0.46 -0.6
692,036 - 10360 mRNA_1992 0.54 0.5
692,039 + 10360 mRNA_1992 0.54 -0.1
692,190 + 10360 mRNA_1992 0.61 -0.1
692,323 + 10360 mRNA_1992 0.67 -0.2
692,457 + 10360 mRNA_1992 0.72 0.4
692,485 + 10360 mRNA_1992 0.74 -0.1
693,067 + -0.0
693,068 - -0.6
693,089 - 0.9
693,095 + 0.1
693,194 - 0.5
693,202 - -0.3
693,210 + 0.7
693,211 + 0.3
693,223 + -0.3
693,223 - 0.2
693,239 + 0.0
693,244 - 0.0
693,248 + 0.5
693,272 + 0.2
693,279 + 0.3
693,315 - -1.7
693,340 - -0.3
693,364 - 0.1
693,374 + 0.4
693,388 - -0.1
693,393 - 0.0
693,399 + -0.6
693,416 - 0.1
693,442 + 0.9
693,553 + -1.0
693,789 - -0.3
693,820 + -0.4
693,839 - -0.2
693,974 + -0.2
694,002 - 0.4