Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1879

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1878: 10246 - K01875 SARS, serS seryl-tRNA synthetase, at 420852 to 422750 10246 mRNA_1879: 10247 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 423115 to 424156 10247 mRNA_1880: 10248 - KOG0254 Predicted transporter (major facilitator superfamily), at 424298 to 426105 10248

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
422,922 - 0.0
422,929 - 0.2
422,933 + 0.3
422,950 - 1.9
423,367 - 10247 mRNA_1879 0.24 0.2
423,393 - 10247 mRNA_1879 0.27 0.2
423,670 + 10247 mRNA_1879 0.53 1.7
423,684 + 10247 mRNA_1879 0.55 0.4
423,933 + 10247 mRNA_1879 0.79 -1.5
423,935 - 10247 mRNA_1879 0.79 -1.0
423,939 - 10247 mRNA_1879 0.79 -0.7
423,981 + 10247 mRNA_1879 0.83 -1.1
424,131 - 0.3
424,314 - -1.2
424,586 - 10248 mRNA_1880 0.16 0.3