Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1849

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1848: 10216 - BLAST PC-Esterase [Xanthophyllomyces dendrorhous], at 362950 to 364987 10216 mRNA_1849: 10217 - Hypothetical Protein, at 365239 to 367490 10217

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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364,241 - 10216 mRNA_1848 0.63 0.0
364,403 - 10216 mRNA_1848 0.71 0.8
364,535 + 10216 mRNA_1848 0.78 1.3
364,576 + 10216 mRNA_1848 0.80 -0.8
364,707 + 10216 mRNA_1848 0.86 -2.9
364,868 - 0.5
364,878 + -0.2
365,167 + 1.4
365,610 + 10217 mRNA_1849 0.16 0.3
365,819 - 10217 mRNA_1849 0.26 -1.5
365,855 + 10217 mRNA_1849 0.27 -0.0
366,005 - 10217 mRNA_1849 0.34 0.3
366,183 + 10217 mRNA_1849 0.42 1.7
366,441 + 10217 mRNA_1849 0.53 -0.5
366,601 - 10217 mRNA_1849 0.60 -0.3
366,740 - 10217 mRNA_1849 0.67 0.3
366,868 - 10217 mRNA_1849 0.72 -0.4
366,871 - 10217 mRNA_1849 0.72 0.1
366,885 + 10217 mRNA_1849 0.73 -0.1
366,886 - 10217 mRNA_1849 0.73 -0.4
366,895 + 10217 mRNA_1849 0.74 -0.8
366,999 + 10217 mRNA_1849 0.78 -1.3
367,178 - 10217 mRNA_1849 0.86 -0.3
367,184 - 10217 mRNA_1849 0.86 0.5
367,186 - 10217 mRNA_1849 0.86 0.6
367,193 + 10217 mRNA_1849 0.87 -0.8
367,199 + 10217 mRNA_1849 0.87 0.6
367,203 + 10217 mRNA_1849 0.87 -0.1
367,206 - 10217 mRNA_1849 0.87 -1.7
367,312 - -0.5
367,350 - -0.9
367,354 + -0.5
367,366 - 0.5
367,380 + 0.2
367,498 + 1.1
367,518 - -0.2
367,519 + -0.1
367,649 + 0.1
367,654 - 0.5
367,655 + 0.0
367,671 + -1.0
367,693 + -1.6
367,713 + 0.9
367,717 - -0.7
367,726 + -1.1
367,728 + 0.7
367,747 - -1.8
367,748 - 1.1
367,755 + -1.0
367,757 + -0.2
367,773 - -0.4
367,774 - -0.5
367,779 - 0.4
367,784 + -0.0
367,789 + -0.1
367,895 + 0.2
367,898 - -0.2
367,909 + 0.8
367,909 - 0.0
367,912 - -0.6
367,916 - -0.0
367,921 - -0.0
367,936 + 1.3
367,939 + -0.1
367,940 + 0.8
367,940 - 0.1
367,960 + 0.4
367,962 + 0.0
367,968 - 0.1
367,985 - 0.1
367,994 + -0.3
367,998 + 0.4
368,031 - -0.0
368,051 + -0.0
368,055 - 0.2
368,064 - -0.4
368,067 + -0.5
368,085 - 0.9
368,109 + 0.2
368,120 - 0.1
368,146 + 0.8
368,407 - 0.0