Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1834

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1833: 10201 - Hypothetical Protein, at 322426 to 322877 10201 mRNA_1834: 10202 - Hypothetical Protein, at 323054 to 324268 10202 mRNA_1835: 10203 - K10601 SYVN1, HRD1 E3 ubiquitin-protein ligase synoviolin, at 324649 to 327501 10203

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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322,153 - -0.6
322,181 + -0.1
322,184 + 0.0
322,191 + 0.4
322,194 + -0.6
322,194 + 1.3
322,224 + -0.6
322,235 - 0.3
322,329 - 0.9
322,334 + -0.3
322,481 - 10201 mRNA_1833 0.12 0.6
322,884 + -0.7
322,904 + 0.3
323,235 + 10202 mRNA_1834 0.15 -0.3
323,273 + 10202 mRNA_1834 0.18 1.2
323,354 - 10202 mRNA_1834 0.25 0.4
323,369 - 10202 mRNA_1834 0.26 -0.3
323,983 - 10202 mRNA_1834 0.76 0.8
324,373 - -0.1
324,383 - 0.2
324,813 + 0.1
325,115 - 10203 mRNA_1835 0.16 0.6