Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1796

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1795: 10163 - K12844 PRPF31 U4/U6 small nuclear ribonucleoprotein PRP31, at 217358 to 219404 10163 mRNA_1796: 10164 - K10878 SPO11 meiotic recombination protein SPO11, at 219619 to 222270 10164 mRNA_1797: 10165 - KOG2641 Predicted seven transmembrane receptor - rhodopsin family, at 222381 to 224884 10165

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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219,243 + -0.3
219,552 - 0.1
219,861 + 0.1
219,868 + -0.5
220,123 + 10164 mRNA_1796 0.19 0.3
220,195 - 10164 mRNA_1796 0.22 0.7
220,413 - 10164 mRNA_1796 0.30 0.6
220,731 - 10164 mRNA_1796 0.42 -0.9
220,736 + 10164 mRNA_1796 0.42 -0.1
221,041 + 10164 mRNA_1796 0.54 -1.2
221,053 - 10164 mRNA_1796 0.54 0.4
222,824 + 10165 mRNA_1797 0.18 -0.4
222,829 + 10165 mRNA_1797 0.18 -0.6
223,088 - 10165 mRNA_1797 0.28 0.6
223,226 - 10165 mRNA_1797 0.34 0.7