Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1770

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1769: 10137 - Interpro F-box-like 0, at 159108 to 161176 10137 mRNA_1770: 10138 - HMMPfam-F-box-like-PF12937, at 161532 to 163380 10138 mRNA_1771: 10139 - K14312 NUP155, NUP170, NUP157 nuclear pore complex protein Nup155, at 163525 to 168544 10139

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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160,548 - 10137 mRNA_1769 0.70 0.5
160,594 - 10137 mRNA_1769 0.72 -2.0
160,813 - 10137 mRNA_1769 0.82 -1.7
160,821 + 10137 mRNA_1769 0.83 -0.7
161,141 - -0.1
162,282 - 10138 mRNA_1770 0.41 -0.0
162,870 - 10138 mRNA_1770 0.72 0.1
162,879 - 10138 mRNA_1770 0.73 0.6
163,221 + 1.6
163,822 - 0.0