Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1733

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1732: 10100 - Hypothetical Protein, at 63566 to 64770 10100 mRNA_1733: 10101 - KOG1021 Acetylglucosaminyltransferase EXT1/exostosin 1, at 65153 to 66958 10101 mRNA_1734: 10102 - KOG1721 FOG Zn-finger, at 67947 to 72087 10102

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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64,217 + 10100 mRNA_1732 0.54 -0.4
64,217 + 10100 mRNA_1732 0.54 0.3
64,240 - 10100 mRNA_1732 0.56 -0.3
64,534 + 10100 mRNA_1732 0.80 -2.0
64,623 + 10100 mRNA_1732 0.88 0.7
64,678 - -0.4
64,684 - 0.0
64,984 - -0.1
65,387 - 10101 mRNA_1733 0.13 -0.1
65,397 + 10101 mRNA_1733 0.14 1.4
65,588 - 10101 mRNA_1733 0.24 0.4
65,608 + 10101 mRNA_1733 0.25 -1.1
65,620 + 10101 mRNA_1733 0.26 1.3
65,974 - 10101 mRNA_1733 0.45 -1.4
66,397 + 10101 mRNA_1733 0.69 1.6
66,419 - 10101 mRNA_1733 0.70 0.6
66,746 - 10101 mRNA_1733 0.88 0.7
66,747 + 10101 mRNA_1733 0.88 -0.2
66,777 + 10101 mRNA_1733 0.90 0.4
67,020 - -1.9
67,043 - -0.3
67,152 - 0.3
67,162 - 0.5
67,213 - 0.1
67,320 + -0.1
67,320 - 0.1
67,321 - -0.0
67,399 - -0.7
67,464 - -0.0
67,470 + 0.0
67,477 - -0.4
67,543 - 1.3
67,543 - -0.0
67,594 - -0.4
67,638 + 0.5
67,670 - 0.5
67,671 - 0.3
67,709 - -0.8
67,848 + -0.4
67,858 + -0.9
67,900 - -0.2