Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1697

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1696: 10064 - BLAST membrane-associating domain protein [Rhizoctonia sola..., at 917668 to 919209 10064 mRNA_1697: 10065 - BLAST Pro41 protein, putative [Rhizoctonia solani AG-3 Rhs1AP], at 919612 to 920343 10065 mRNA_1698: 10066 - K11493 RCC1 regulator of chromosome condensation, at 920689 to 923433 10066

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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918,783 + 10064 mRNA_1696 0.72 -0.5
918,954 + 10064 mRNA_1696 0.83 -0.7
918,954 + 10064 mRNA_1696 0.83 0.9
919,066 + -0.4
919,203 - 1.2
919,222 + -0.0
919,227 - 0.4
919,291 - 0.4
919,292 + -0.2
919,292 + 1.0
919,499 - 0.1
919,696 - 10065 mRNA_1697 0.11 0.8
919,799 + 10065 mRNA_1697 0.26 0.4
919,996 + 10065 mRNA_1697 0.52 0.5
920,132 - 10065 mRNA_1697 0.71 -0.1
920,155 + 10065 mRNA_1697 0.74 0.2
920,284 - -0.2
920,393 - -0.3
920,463 + -0.1
920,553 + 0.4
920,555 + 0.8