Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1628

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1627: 9995 - K18551 SDT1 pyrimidine and pyridine-specific 5'-nucleotidase, at 751734 to 753010 9995 mRNA_1628: 9996 - Hypothetical Protein, at 753218 to 753980 9996 mRNA_1629: 9997 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 754772 to 756288 9997

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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752,287 - 9995 mRNA_1627 0.43 -2.2
753,045 + -2.6
753,046 - -2.6
753,203 + -0.2
753,207 + -0.5
753,218 + -2.3
753,219 - 0.1
753,236 - -2.2
753,507 + 9996 mRNA_1628 0.38 -2.5
753,819 - 9996 mRNA_1628 0.79 -0.6
754,233 + -1.2
754,535 + -2.7
754,686 + -1.3
754,686 - -1.9