Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1589

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1588: 9956 - HMMPfam-Domain of unknown function (DUF202)-PF02656, at 665210 to 666583 9956 mRNA_1589: 9957 - Hypothetical Protein, at 666700 to 668966 9957 mRNA_1590: 9958 - KOG0586 Serine/threonine protein kinase, at 669702 to 673169 9958

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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665,742 + 9956 mRNA_1588 0.39 -1.7
666,727 + -0.2
667,153 + 9957 mRNA_1589 0.20 0.9
668,052 + 9957 mRNA_1589 0.60 -4.0
668,753 + -1.2
669,188 - -1.2
669,192 + -1.3
669,217 + -1.0
669,228 + -1.1
669,478 + -4.0
669,515 - -2.4
669,618 - -1.0
669,636 - -0.3
669,680 + -0.8
669,697 + -0.5
669,711 + -1.7
669,847 - 2.2