Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1567

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1566: 9934 - Hypothetical Protein, at 610347 to 612663 9934 mRNA_1567: 9935 - KOG4129 Exopolyphosphatases and related proteins, at 612854 to 615039 9935 mRNA_1568: 9936 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 615434 to 616155 9936

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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612,380 + 9934 mRNA_1566 0.88 0.2
612,560 + -0.1
612,707 + -2.2
612,753 - -0.0
613,277 - 9935 mRNA_1567 0.19 -0.9
613,301 - 9935 mRNA_1567 0.20 0.2
613,767 - 9935 mRNA_1567 0.42 -0.2
614,044 - 9935 mRNA_1567 0.54 1.0
614,204 - 9935 mRNA_1567 0.62 -3.2
614,452 - 9935 mRNA_1567 0.73 -2.1
614,477 - 9935 mRNA_1567 0.74 -0.6
614,518 - 9935 mRNA_1567 0.76 0.0
614,619 - 9935 mRNA_1567 0.81 -2.4
614,756 + 9935 mRNA_1567 0.87 -3.7
614,757 - 9935 mRNA_1567 0.87 -1.4
615,048 - -0.2
615,068 + -0.5
615,071 - -0.1
615,093 - -1.1
615,355 - -1.9
615,387 - -0.2
615,390 + 0.9
615,932 - 9936 mRNA_1568 0.69 -2.5