Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1566

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1565: 9933 - KOG1860 Nuclear protein export factor, at 604614 to 609512 9933 mRNA_1566: 9934 - Hypothetical Protein, at 610347 to 612663 9934 mRNA_1567: 9935 - KOG4129 Exopolyphosphatases and related proteins, at 612854 to 615039 9935

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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609,600 + -1.8
609,605 - -3.0
609,606 - 1.1
609,611 + -1.6
609,612 + -3.6
609,613 - -1.0
609,619 - -0.9
609,770 - -0.5
609,782 + -1.9
609,788 - -0.1
609,806 - -0.5
609,907 - -0.9
609,918 + -2.6
609,936 - -2.2
609,946 + -0.6
609,948 + -2.8
609,968 + -0.1
610,067 + -0.8
610,069 - -0.9
610,075 - -2.1
610,083 + -1.0
610,227 + -1.2
610,264 + -0.2
610,265 + -0.5
610,375 - -0.9
610,376 + -0.4
610,531 + -1.9
611,366 - 9934 mRNA_1566 0.44 -0.1
611,396 + 9934 mRNA_1566 0.45 -2.9
611,398 - 9934 mRNA_1566 0.45 -0.5
611,408 + 9934 mRNA_1566 0.46 -1.7
611,644 + 9934 mRNA_1566 0.56 -0.7
612,380 + 9934 mRNA_1566 0.88 0.2
612,560 + -0.1
612,707 + -2.2
612,753 - -0.0
613,277 - 9935 mRNA_1567 0.19 -0.9
613,301 - 9935 mRNA_1567 0.20 0.2