Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1546

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1545: 9913 - Hypothetical Protein, at 558416 to 558832 9913 mRNA_1546: 9914 - K18040 PTPN23 tyrosine-protein phosphatase non-receptor type 23, at 559318 to 562481 9914 mRNA_1547: 9915 - K14402 CPSF2, CFT2 cleavage and polyadenylation specificity factor subunit 2, at 562585 to 566021 9915

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
558,332 - -1.0
558,349 + -1.8
558,350 - -1.0
558,483 + 9913 mRNA_1545 0.16 -1.9
558,509 - 9913 mRNA_1545 0.22 -1.3
558,648 + 9913 mRNA_1545 0.56 -2.2
558,781 + 9913 mRNA_1545 0.88 -1.0
558,928 + -0.8
559,080 + 0.1
559,088 + -1.4
559,144 - -0.8
559,216 + -1.2
559,242 - -1.0
559,347 - -2.7
559,365 - -1.9
559,391 - -3.7
559,674 + 9914 mRNA_1546 0.11 -1.6
561,259 - 9914 mRNA_1546 0.61 -2.6
562,082 - 9914 mRNA_1546 0.87 0.8
562,104 - 9914 mRNA_1546 0.88 1.6
562,407 - -1.1
562,518 + -1.8