Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1531

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1530: 9898 - K15296 NAPA, SNAPA, SEC17 alpha-soluble NSF attachment protein, at 524538 to 525796 9898 mRNA_1531: 9899 - KOG1852 Cell cycle-associated protein, at 526085 to 527071 9899 mRNA_1532: 9900 - K00766 trpD anthranilate phosphoribosyltransferase, at 527155 to 528581 9900

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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525,271 + 9898 mRNA_1530 0.58 1.2
526,439 - 9899 mRNA_1531 0.36 -0.6
526,464 + 9899 mRNA_1531 0.38 -1.7
526,573 + 9899 mRNA_1531 0.49 -0.3
526,888 + 9899 mRNA_1531 0.81 -1.6
526,938 + 9899 mRNA_1531 0.86 1.3
526,998 - 0.2