Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1517

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1516: 9884 - BLAST transmembrane ATP-binding protein ABC transporter [Rh..., at 492148 to 493899 9884 mRNA_1517: 9885 - HMMPfam-Alternative oxidase-PF01786,PIRSF--PIRSF005229, at 494782 to 496298 9885 mRNA_1518: 9886 - K03521 fixA, etfB electron transfer flavoprotein beta subunit, at 496923 to 498027 9886

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
493,826 - -1.8
493,853 + -0.7
493,863 + -0.7
493,867 + -1.0
493,908 - -1.8
493,923 - -2.3
493,926 + -0.7
493,939 - -0.0
493,943 - -1.9
493,951 - -2.3
493,977 - 0.7
494,022 + -1.7
494,025 + -0.7
494,033 + -1.8
494,033 - -0.7
494,037 + -0.7
494,039 - -4.0
494,054 - -2.4
494,060 + -1.7
494,112 - 0.0
494,114 - -0.9
494,115 + -2.0
494,120 - -2.4
494,124 + 0.2
494,127 + -1.0
494,131 + -1.7
494,132 - -2.4
494,163 - -3.3
494,169 + 0.7
494,184 + -1.7
494,195 - -0.7
494,204 + -2.3
494,204 - -1.0
494,214 + -1.9
494,214 - -1.6
494,219 + -1.6
494,219 + -2.4
494,229 + -1.9
494,240 + -0.7
494,240 + -0.7
494,241 + -0.6
494,261 + -5.2
494,271 - -2.3
494,271 - -3.1
494,277 + 1.0
494,286 - -0.9
494,287 - 0.4
494,289 - -0.5
494,291 + -1.4
494,292 + -3.0
494,311 - 0.4
494,311 - -2.8
494,318 + -1.0
494,318 + -1.2
494,321 + -2.7
494,321 + -1.8
494,323 - 0.5
494,325 - -0.6
494,326 - 0.0
494,330 - 0.1
494,330 + -0.9
494,332 + -2.1
494,335 + -2.8
494,343 + -1.8
494,390 + -2.5
494,431 + -0.8
494,450 + -1.5
494,473 + -1.8
494,475 + -0.6
494,530 + -0.2
494,572 + 0.2
494,583 + -2.2
494,594 + -0.6
494,625 - -0.5
494,626 + -1.5
494,654 - -0.5
494,658 + -1.9
494,687 - -3.6
494,740 - 0.3
494,791 + -2.4
494,823 + 0.2
494,880 + -0.8
494,901 - -2.6
494,919 - -0.6
494,967 + 9885 mRNA_1517 0.12 -2.9
494,981 - 9885 mRNA_1517 0.13 -2.8
495,002 + 9885 mRNA_1517 0.15 0.0
495,006 + 9885 mRNA_1517 0.15 -3.1
495,054 - 9885 mRNA_1517 0.18 -3.1
495,125 + 9885 mRNA_1517 0.23 -0.6
495,151 - 9885 mRNA_1517 0.24 -2.0
495,156 + 9885 mRNA_1517 0.25 -1.5
495,216 - 9885 mRNA_1517 0.29 -1.0
495,216 - 9885 mRNA_1517 0.29 -1.1
495,356 - 9885 mRNA_1517 0.38 -1.9
495,470 + 9885 mRNA_1517 0.45 -1.7
495,479 + 9885 mRNA_1517 0.46 -1.9
496,039 - 9885 mRNA_1517 0.83 -1.5
496,039 - 9885 mRNA_1517 0.83 -0.5
496,317 + -3.1
496,346 - -0.2
496,400 - -2.4
496,466 + -1.8
496,476 + -0.6
496,488 + -0.9
496,556 + -0.4
496,578 - -3.7
496,595 + -0.4
496,596 + -2.5
496,606 + -1.8
496,613 + -2.5
496,652 - -0.8
496,690 + -0.2
496,691 + -0.5
496,696 + 0.2
496,696 + -1.2
496,699 - -2.4
496,716 - -1.1
496,753 - -1.1
496,772 - -1.0
496,772 - 1.7
496,772 - -1.1
496,782 + -0.3
496,785 - -0.8
496,787 + -2.8
496,789 + -1.9
496,795 + -0.6
496,799 + -1.3
496,799 + -1.2
496,806 + -3.6
496,823 + 0.6
496,909 + -2.0
497,184 + 9886 mRNA_1518 0.24 0.4