Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1507

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1506: 9874 - Hypothetical Protein, at 468569 to 469292 9874 mRNA_1507: 9875 - HMMPfam-Cupin domain-PF07883,SUPERFAMILY--SSF51182, at 469945 to 470941 9875 mRNA_1508: 9876 - KOG3140 Predicted membrane protein, at 471301 to 473619 9876

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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469,709 - -2.0
469,768 + -1.2
469,779 - -1.9
469,856 + -2.1
469,874 - -2.2
469,883 + -1.6
469,976 - -0.5
469,999 - -1.0
470,135 + 9875 mRNA_1507 0.19 0.8
470,240 - 9875 mRNA_1507 0.30 -0.7
470,253 + 9875 mRNA_1507 0.31 -0.5
470,395 + 9875 mRNA_1507 0.45 0.4
470,410 - 9875 mRNA_1507 0.47 -2.6
470,444 + 9875 mRNA_1507 0.50 -0.9
470,449 + 9875 mRNA_1507 0.51 -0.5
470,463 - 9875 mRNA_1507 0.52 -1.7
470,469 + 9875 mRNA_1507 0.53 -2.8
470,700 + 9875 mRNA_1507 0.76 -1.6
470,717 - 9875 mRNA_1507 0.77 -2.0
470,743 - 9875 mRNA_1507 0.80 -0.6
470,869 - -2.0
470,929 - -0.7
471,348 + -1.2