Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1505

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1504: 9872 - K11251 H2A histone H2A, at 466293 to 467391 9872 mRNA_1505: 9873 - Hypothetical Protein, at 467466 to 468083 9873 mRNA_1506: 9874 - Hypothetical Protein, at 468569 to 469292 9874

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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467,420 - -1.9
467,430 - -1.0
467,559 - 9873 mRNA_1505 0.15 -1.2
467,597 + 9873 mRNA_1505 0.21 -1.5
467,672 + 9873 mRNA_1505 0.33 -0.1
467,677 + 9873 mRNA_1505 0.34 -2.7
467,685 - 9873 mRNA_1505 0.35 -1.9
467,735 - 9873 mRNA_1505 0.44 -3.1
467,738 + 9873 mRNA_1505 0.44 -0.1
467,752 + 9873 mRNA_1505 0.46 -3.5
467,905 - 9873 mRNA_1505 0.71 -2.7
467,995 + 9873 mRNA_1505 0.86 -0.4
468,040 + -0.6
468,143 - -1.7
468,180 + -2.8
468,183 - 0.0
468,185 - -0.6
468,195 + -0.1
468,204 + -1.0
468,210 + -0.7
468,220 - 0.0
468,221 - -1.3
468,254 + -0.4
468,338 + -3.0
468,357 + -4.0
468,361 - 0.1
468,365 + -1.7
468,463 + -3.8
468,541 + -0.4
468,660 - 9874 mRNA_1506 0.13 -1.0