Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1461

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1460: 9828 - K06911 K06911 uncharacterized protein, at 344701 to 345995 9828 mRNA_1461: 9829 - K02503 HINT1, hinT, hit histidine triad (HIT) family protein, at 346696 to 347592 9829 mRNA_1462: 9830 - K01764 E4.4.1.17 cytochrome c heme-lyase, at 347942 to 349022 9830

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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345,883 + -0.8
345,887 - -0.2
345,887 - -0.5
346,045 + -1.5
346,183 - -0.9
346,184 - -2.2
346,320 - -3.1
346,483 + -1.2
346,504 - -0.9
346,922 + 9829 mRNA_1461 0.25 -3.7
347,199 + 9829 mRNA_1461 0.56 -1.1
347,208 + 9829 mRNA_1461 0.57 -2.2
347,287 + 9829 mRNA_1461 0.66 -0.5
347,330 + 9829 mRNA_1461 0.71 -1.5
347,489 + 9829 mRNA_1461 0.88 0.2
347,761 + 1.6
347,872 + -0.6