Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1457

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1456: 9824 - Hypothetical Protein, at 334621 to 335519 9824 mRNA_1457: 9825 - K00549 metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, at 336305 to 339274 9825 mRNA_1458: 9826 - K17775 MDM34, MMM2 mitochondrial distribution and morphology protein 34, at 339999 to 342727 9826

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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335,522 + -3.0
335,672 - -2.4
335,776 + -1.5
335,805 - -1.6
335,830 - -0.1
335,965 - -1.5
336,096 + 0.0
336,098 + -1.5
336,155 - -1.2
336,158 + -0.0
336,217 - -1.7
336,261 - -2.4
336,731 - 9825 mRNA_1457 0.14 -0.9
336,808 + 9825 mRNA_1457 0.17 -2.1
336,980 - 9825 mRNA_1457 0.23 -1.6
337,143 - 9825 mRNA_1457 0.28 -0.4
337,430 + 9825 mRNA_1457 0.38 -0.6
337,721 - 9825 mRNA_1457 0.48 -1.4
337,742 + 9825 mRNA_1457 0.48 0.0
339,024 + -0.8
339,287 + -2.6
339,288 + -0.9
339,292 - -0.9
339,307 - -1.5
339,425 - -1.9
339,444 - -0.6
339,466 - -3.5
339,471 - -1.4
339,471 - -1.5
339,471 - -1.7
339,473 - -2.9
339,473 - -1.3
339,474 + -1.0
339,477 + -0.0
339,481 + -1.0
339,483 + 0.2
339,485 + -0.8
339,488 - 0.2
339,490 + -3.2
339,494 - -1.0
339,495 + -1.7
339,496 - -2.9
339,594 - -2.5
339,623 + -0.7
339,670 - 0.5
339,672 - -0.9
339,679 + -0.1
339,681 + -2.4
339,777 - -0.2
339,788 - -3.1
339,795 + 0.1
339,808 - 0.1
339,811 - -1.5
339,815 - -0.3
339,822 + -1.9
339,979 + -0.8