Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1456

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1455: 9823 - BLAST patatin-like phospholipase domain protein [Rhizoctoni..., at 331786 to 334001 9823 mRNA_1456: 9824 - Hypothetical Protein, at 334621 to 335519 9824 mRNA_1457: 9825 - K00549 metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, at 336305 to 339274 9825

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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333,728 + 9823 mRNA_1455 0.88 1.2
333,756 - 9823 mRNA_1455 0.89 -1.0
333,756 - 9823 mRNA_1455 0.89 -1.5
333,767 + 9823 mRNA_1455 0.89 -1.5
333,852 - -1.7
333,882 - -0.7
333,902 + -3.9
333,914 + -1.6
334,030 + -1.9
334,042 - -0.1
334,047 - -1.1
334,051 - -1.4
334,072 + -2.4
334,334 - 1.2
334,494 + -1.0
334,567 + -1.3
334,803 + 9824 mRNA_1456 0.20 -0.5
335,081 + 9824 mRNA_1456 0.51 -2.0
335,105 - 9824 mRNA_1456 0.54 -1.1
335,522 + -3.0
335,672 - -2.4
335,776 + -1.5
335,805 - -1.6
335,830 - -0.1
335,965 - -1.5
336,096 + 0.0
336,098 + -1.5
336,155 - -1.2
336,158 + -0.0
336,217 - -1.7
336,261 - -2.4