Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1392

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1391: 9759 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 160091 to 161111 9759 mRNA_1392: 9760 - HMMPfam-DASH complex subunit Dam1-PF08653, at 161776 to 163110 9760 mRNA_1393: 9761 - Hypothetical Protein, at 163263 to 164488 9761

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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160,802 - 9759 mRNA_1391 0.70 -0.2
160,850 + 9759 mRNA_1391 0.74 -1.4
161,101 - -1.0
161,125 + -1.5
161,275 - -0.6
161,282 - -1.5
161,292 - -1.9
161,416 - -1.1
161,429 - -2.0
161,555 - 1.2
162,396 + 9760 mRNA_1392 0.46 2.0
162,859 + 9760 mRNA_1392 0.81 0.3
163,017 + -0.1
163,165 + -3.0
163,586 - 9761 mRNA_1393 0.26 -1.6
163,730 - 9761 mRNA_1393 0.38 0.7