Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1385

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1384: 9752 - KOG4472 Glycolipid 2-alpha-mannosyltransferase (alpha-1,2-mannosyltransferase), at 143801 to 145438 9752 mRNA_1385: 9753 - K06966 K06966 uncharacterized protein, at 145892 to 146941 9753 mRNA_1386: 9754 - K06966 K06966 uncharacterized protein, at 147599 to 148550 9754

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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145,281 - -0.2
145,344 + -1.2
145,463 + -1.3
145,587 + 0.1
145,601 - -0.5
145,605 - -1.0
145,609 + -0.4
145,744 + -2.7
145,748 - -0.9
145,769 + -1.8
145,887 - -1.1
145,896 + -1.5
146,026 - 9753 mRNA_1385 0.13 -0.4
146,077 - 9753 mRNA_1385 0.18 -1.9
146,475 - 9753 mRNA_1385 0.56 -1.4
146,618 - 9753 mRNA_1385 0.69 -1.5
146,748 - 9753 mRNA_1385 0.82 -2.5
146,924 - -1.4
146,958 + -1.3
147,043 - -0.9
147,053 - -0.8
147,074 + -2.3
147,512 - -1.1
147,657 - 0.5
147,674 + -0.8