Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1367

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1366: 9734 - K00661 maa maltose O-acetyltransferase, at 105397 to 106460 9734 mRNA_1367: 9735 - K03233 EEF1G elongation factor 1-gamma, at 106812 to 108790 9735 mRNA_1368: 9736 - K03233 EEF1G elongation factor 1-gamma, at 109072 to 110968 9736

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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106,049 + 9734 mRNA_1366 0.61 -1.3
106,165 - 9734 mRNA_1366 0.72 -2.9
106,178 + 9734 mRNA_1366 0.73 -0.8
106,579 - -1.1
106,598 + -1.8
106,603 + -3.0
106,605 + -1.3
106,608 - -2.3
106,609 - -1.4
106,612 + -0.4
106,615 - -0.7
106,645 + -1.4
106,653 - 0.9
106,673 + -1.2
106,676 - -1.4
106,817 + -1.9
107,514 + 9735 mRNA_1367 0.35 -0.2
107,812 + 9735 mRNA_1367 0.51 -0.2
108,237 + 9735 mRNA_1367 0.72 -1.9
108,573 - 9735 mRNA_1367 0.89 0.3
108,710 - 0.6
108,849 + -2.4
108,856 + -2.5
108,862 - -2.4
108,865 + -1.9
108,999 - -2.0