Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1290

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1289: 9657 - K05681 ABCG2, CD338 ATP-binding cassette, subfamily G (WHITE), member 2, at 840459 to 844214 9657 mRNA_1290: 9658 - K03872 TCEB1 transcription elongation factor B, polypeptide 1, at 844469 to 844987 9658 mRNA_1291: 9659 - KOG3350 Uncharacterized conserved protein, at 845100 to 846215 9659

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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844,116 - -2.4
844,456 - -1.0
844,559 - 9658 mRNA_1290 0.17 -3.2
844,863 + 9658 mRNA_1290 0.76 -1.3
844,877 - 9658 mRNA_1290 0.79 -2.1
845,010 - -0.8
845,011 + 0.5
845,019 - -1.0
845,029 + 1.6
845,169 + -1.3
845,448 + 9659 mRNA_1291 0.31 -2.7
845,880 - 9659 mRNA_1291 0.70 -1.8