Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1276

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1275: 9643 - K11426 SMYD SET and MYND domain-containing protein, at 813494 to 815725 9643 mRNA_1276: 9644 - K01070 frmB, ESD, fghA S-formylglutathione hydrolase, at 815898 to 817599 9644 mRNA_1277: 9645 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 817751 to 818897 9645

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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815,057 + 9643 mRNA_1275 0.70 -1.4
815,061 + 9643 mRNA_1275 0.70 -1.1
815,378 - 9643 mRNA_1275 0.84 -1.6
815,490 - 9643 mRNA_1275 0.89 -1.8
815,500 + 9643 mRNA_1275 0.90 -1.1
815,519 + -0.7
815,755 - -3.7
815,790 + -0.7
815,793 - -0.1
815,806 + -0.3
816,101 + 9644 mRNA_1276 0.12 0.4
816,535 + 9644 mRNA_1276 0.37 -1.2
816,554 + 9644 mRNA_1276 0.39 -2.8
816,874 + 9644 mRNA_1276 0.57 -0.9
816,875 - 9644 mRNA_1276 0.57 -2.2
817,059 + 9644 mRNA_1276 0.68 -3.1
817,420 + 9644 mRNA_1276 0.89 -1.5
817,493 + 2.0
817,794 - -0.3
818,402 + 9645 mRNA_1277 0.57 -1.9
818,512 + 9645 mRNA_1277 0.66 -3.2
818,527 - 9645 mRNA_1277 0.68 -3.1
818,533 + 9645 mRNA_1277 0.68 -1.5
818,536 + 9645 mRNA_1277 0.68 -1.6