Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1274

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1273: 9641 - BLAST priB [Histoplasma capsulatum H143], at 808747 to 810374 9641 mRNA_1274: 9642 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 810580 to 813182 9642 mRNA_1275: 9643 - K11426 SMYD SET and MYND domain-containing protein, at 813494 to 815725 9643

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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809,782 + 9641 mRNA_1273 0.64 -2.1
810,331 - -0.7
810,350 + -0.2
810,351 - -2.7
810,480 + -0.4
810,515 + -1.0
810,798 - -2.5
810,820 - -1.8
810,918 + 9642 mRNA_1274 0.13 -0.8
810,919 - 9642 mRNA_1274 0.13 -0.4
810,922 + 9642 mRNA_1274 0.13 -1.0
811,122 - 9642 mRNA_1274 0.21 -0.7
811,129 + 9642 mRNA_1274 0.21 -2.2
811,132 - 9642 mRNA_1274 0.21 -0.7
811,202 + 9642 mRNA_1274 0.24 -2.1
811,206 - 9642 mRNA_1274 0.24 -2.6
811,250 - 9642 mRNA_1274 0.26 -2.4
811,488 - 9642 mRNA_1274 0.35 -0.7
811,581 - 9642 mRNA_1274 0.38 -2.2
811,658 - 9642 mRNA_1274 0.41 -2.0
811,687 + 9642 mRNA_1274 0.43 -0.8
811,826 + 9642 mRNA_1274 0.48 -2.1
811,842 + 9642 mRNA_1274 0.48 -1.2
811,949 - 9642 mRNA_1274 0.53 -1.9
811,991 - 9642 mRNA_1274 0.54 -0.6
812,130 - 9642 mRNA_1274 0.60 -1.1
812,140 - 9642 mRNA_1274 0.60 -0.1
812,147 - 9642 mRNA_1274 0.60 -3.1
812,160 - 9642 mRNA_1274 0.61 -0.7
812,160 - 9642 mRNA_1274 0.61 0.6
812,166 + 9642 mRNA_1274 0.61 -0.4
812,190 - 9642 mRNA_1274 0.62 -1.9
812,579 + 9642 mRNA_1274 0.77 -0.2
812,604 + 9642 mRNA_1274 0.78 -0.6
812,687 - 9642 mRNA_1274 0.81 -2.7
813,176 - -1.6
813,219 - 2.3
813,470 + -0.6
813,618 - -2.7
813,672 + 0.2
813,740 + 9643 mRNA_1275 0.11 -1.0
813,804 + 9643 mRNA_1275 0.14 -0.1
814,057 + 9643 mRNA_1275 0.25 -2.5