Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1255

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1254: 9622 - K02150 ATPeV1E, ATP6E V-type H+-transporting ATPase subunit E, at 761130 to 762354 9622 mRNA_1255: 9623 - KOG1808 AAA ATPase containing von Willebrand factor type A (vWA) domain, at 762538 to 767686 9623 mRNA_1256: 9624 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF81383, at 767980 to 768375 9624

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
762,449 + -1.5
762,483 - -0.6
762,483 - 1.8
762,484 + -1.5
762,486 + -0.4
762,489 - -0.9
762,511 + -3.5
762,586 + -2.8
762,591 - -2.5
762,619 + -2.5
762,635 - -1.1
762,642 + -0.0
762,646 + -1.4
762,669 + -2.2
762,771 - -2.7
762,789 - -1.4
762,934 - -2.4
762,976 + -2.7
763,041 - -1.2
763,050 + -0.3
763,095 - 9623 mRNA_1255 0.11 -3.0
763,231 - 9623 mRNA_1255 0.13 0.8
763,237 + 9623 mRNA_1255 0.14 -0.5
763,240 + 9623 mRNA_1255 0.14 1.6
763,322 - 9623 mRNA_1255 0.15 -1.0
763,359 + 9623 mRNA_1255 0.16 -1.2
763,481 - 9623 mRNA_1255 0.18 -1.2
763,563 - 9623 mRNA_1255 0.20 0.2
763,826 - 9623 mRNA_1255 0.25 -3.6
763,834 - 9623 mRNA_1255 0.25 -1.8
763,941 - 9623 mRNA_1255 0.27 -2.5
764,251 - 9623 mRNA_1255 0.33 -1.9
764,343 + 9623 mRNA_1255 0.35 -2.0
764,386 + 9623 mRNA_1255 0.36 -2.3
764,580 + 9623 mRNA_1255 0.40 -1.4
764,633 + 9623 mRNA_1255 0.41 -2.4
764,683 - 9623 mRNA_1255 0.42 -3.0
764,712 - 9623 mRNA_1255 0.42 -1.3
764,857 - 9623 mRNA_1255 0.45 -0.5
764,858 - 9623 mRNA_1255 0.45 0.1
764,917 + 9623 mRNA_1255 0.46 -1.7
764,962 + 9623 mRNA_1255 0.47 -2.0
765,275 - 9623 mRNA_1255 0.53 -1.4
765,413 - 9623 mRNA_1255 0.56 -3.0
765,434 - 9623 mRNA_1255 0.56 -1.0
765,434 - 9623 mRNA_1255 0.56 -1.5
765,509 - 9623 mRNA_1255 0.58 -2.1
765,513 + 9623 mRNA_1255 0.58 -0.2
765,514 - 9623 mRNA_1255 0.58 -1.7
765,519 - 9623 mRNA_1255 0.58 1.8
765,519 - 9623 mRNA_1255 0.58 -1.1
765,540 + 9623 mRNA_1255 0.58 -2.3
765,546 + 9623 mRNA_1255 0.58 -1.5
765,613 + 9623 mRNA_1255 0.60 0.3
765,657 + 9623 mRNA_1255 0.61 -0.3
765,681 - 9623 mRNA_1255 0.61 -1.5
765,705 - 9623 mRNA_1255 0.62 -1.7
765,803 + 9623 mRNA_1255 0.63 -0.6
765,816 - 9623 mRNA_1255 0.64 -1.8
765,934 + 9623 mRNA_1255 0.66 -0.5
765,984 - 9623 mRNA_1255 0.67 -1.4
766,023 - 9623 mRNA_1255 0.68 -3.0
766,025 - 9623 mRNA_1255 0.68 0.2
766,154 - 9623 mRNA_1255 0.70 -1.1
766,401 + 9623 mRNA_1255 0.75 -0.4
766,461 - 9623 mRNA_1255 0.76 -0.2
766,493 - 9623 mRNA_1255 0.77 -1.9
766,562 - 9623 mRNA_1255 0.78 -3.5
766,767 + 9623 mRNA_1255 0.82 0.9
766,878 + 9623 mRNA_1255 0.84 -1.5
766,892 + 9623 mRNA_1255 0.85 -0.5
767,011 + 9623 mRNA_1255 0.87 -1.9
767,045 - 9623 mRNA_1255 0.88 -1.3
767,126 - 9623 mRNA_1255 0.89 -1.2
767,350 - -2.3
767,470 - -3.0
767,726 - 1.3
767,750 + -2.6
767,910 + -5.3
767,914 - -1.6
768,001 + -0.2
768,011 + -2.8
768,383 - -2.8
768,531 - -2.0
768,537 + -3.5
768,631 + -2.8