Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1251

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1250: 9618 - Hypothetical Protein, at 754124 to 756266 9618 mRNA_1251: 9619 - HMMPfam-Protein of unknown function (DUF2611)-PF11022, at 756531 to 757355 9619 mRNA_1252: 9620 - BLAST glycosyltransferase family 22 protein [Mixia osmu..., at 757595 to 759040 9620

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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755,913 - 9618 mRNA_1250 0.83 -1.7
756,465 - -0.7
756,469 + -1.1
756,472 + -3.7
756,482 - -1.8
756,486 - -3.2
756,487 + -2.8
756,488 - -0.5
756,647 + 9619 mRNA_1251 0.14 -1.6
756,671 + 9619 mRNA_1251 0.17 -2.9
756,786 + 9619 mRNA_1251 0.31 -0.4
756,797 + 9619 mRNA_1251 0.32 -0.8
757,182 + 9619 mRNA_1251 0.79 -1.8
757,183 - 9619 mRNA_1251 0.79 -0.1
757,490 + -0.7
757,563 + -1.5
757,647 - 0.1
757,692 - -4.0
757,944 + 9620 mRNA_1252 0.24 -2.2
758,220 - 9620 mRNA_1252 0.43 -2.1
758,237 - 9620 mRNA_1252 0.44 -1.8