Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1245

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1244: 9612 - SUPERFAMILY--SSF52047, at 739687 to 741319 9612 mRNA_1245: 9613 - HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481, at 741721 to 743435 9613 mRNA_1246: 9614 - SUPERFAMILY--SSF52047, at 743488 to 744876 9614

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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740,906 + 9612 mRNA_1244 0.75 0.4
741,093 - 9612 mRNA_1244 0.86 -2.9
741,258 + -1.8
741,354 + -0.6
741,529 + -2.6
741,636 - -2.5
741,654 - -1.5
741,660 - -0.1
741,948 - 9613 mRNA_1245 0.13 1.3
742,513 + 9613 mRNA_1245 0.46 0.2
742,646 + 9613 mRNA_1245 0.54 -2.2
742,835 + 9613 mRNA_1245 0.65 -2.3
743,305 + -1.9
744,164 - 9614 mRNA_1246 0.49 0.5
744,245 - 9614 mRNA_1246 0.54 -2.7
744,375 + 9614 mRNA_1246 0.64 -2.3