Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1243

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1242: 9610 - K01110 PTEN phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, at 736191 to 738180 9610 mRNA_1243: 9611 - K02493 hemK, prmC, HEMK release factor glutamine methyltransferase, at 738287 to 739305 9611 mRNA_1244: 9612 - SUPERFAMILY--SSF52047, at 739687 to 741319 9612

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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737,909 + 9610 mRNA_1242 0.86 -2.9
737,973 - 9610 mRNA_1242 0.90 -3.1
737,973 - 9610 mRNA_1242 0.90 -2.2
738,159 + -1.7
738,167 - 2.2
738,170 + -0.2
738,508 - 9611 mRNA_1243 0.22 -0.5
739,182 + 9611 mRNA_1243 0.88 -2.9
739,310 + -2.0
739,455 - -3.1
739,458 - -1.8
739,461 + -2.2
739,480 + -1.9
739,596 - -2.0
739,606 - -3.0
739,609 - -0.8
739,628 - -3.6
739,634 - -1.8
739,635 + -1.3
739,639 + -0.8
739,770 + -4.8
739,771 - -1.0
739,778 + -1.1
739,782 + -2.6
739,914 - 9612 mRNA_1244 0.14 -0.3
739,918 - 9612 mRNA_1244 0.14 -2.6
739,963 - 9612 mRNA_1244 0.17 -3.2