Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1237

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1236: 9604 - K02377 TSTA3, fcl GDP-L-fucose synthase, at 722261 to 724161 9604 mRNA_1237: 9605 - SUPERFAMILY--SSF52047, at 724433 to 725551 9605 mRNA_1238: 9606 - SUPERFAMILY--SSF52047, at 726176 to 728961 9606

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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724,220 - -0.9
724,390 - -2.5
724,421 - -3.2
724,700 - 9605 mRNA_1237 0.24 -1.0
724,708 + 9605 mRNA_1237 0.25 -2.3
724,710 - 9605 mRNA_1237 0.25 -1.6
724,719 + 9605 mRNA_1237 0.26 -2.3
724,797 + 9605 mRNA_1237 0.33 -1.8
724,809 + 9605 mRNA_1237 0.34 -1.1
724,816 + 9605 mRNA_1237 0.34 0.7
724,817 - 9605 mRNA_1237 0.34 -1.2
725,009 + 9605 mRNA_1237 0.51 -1.6
725,143 + 9605 mRNA_1237 0.63 -0.9
725,492 + -3.8
725,698 - -2.9
725,715 + -2.2
725,715 - -3.2
725,750 - 1.2
725,752 - 0.9
725,753 - -1.6
725,771 + -2.0
725,877 + -3.0
726,057 + -3.5
726,077 - -2.5
726,206 - -0.4
726,208 - -2.5
726,218 - -2.2
726,345 - -1.9
726,386 + -1.7
726,406 - 2.0