Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1227

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1226: 9594 - K01262 pepP Xaa-Pro aminopeptidase, at 693784 to 696236 9594 mRNA_1227: 9595 - KOG1318 Helix loop helix transcription factor EB, at 696629 to 699042 9595 mRNA_1228: 9596 - K00693 GYS glycogen synthase, at 699587 to 703104 9596

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
695,730 - 9594 mRNA_1226 0.79 -2.4
696,201 - -1.9
696,304 + -3.9
696,348 - -0.9
696,602 - 0.0
696,809 + 0.2
696,818 - -1.5
696,940 - 9595 mRNA_1227 0.13 -1.7
696,948 + 9595 mRNA_1227 0.13 -2.2
696,965 + 9595 mRNA_1227 0.14 -0.6
697,024 - 9595 mRNA_1227 0.16 -0.3
697,539 - 9595 mRNA_1227 0.38 0.3
697,747 + 9595 mRNA_1227 0.46 -0.4
698,579 - 9595 mRNA_1227 0.81 -1.1
699,044 - -0.0
699,135 + -0.4
699,138 + -1.4
699,169 + 0.9
699,250 - -1.3
699,253 - -0.1
699,262 + -1.5
699,263 + -1.3
699,263 - -0.9
699,278 + -1.2
699,326 - -1.9
699,346 + -0.1
699,356 - -0.4
699,358 - 1.4
699,368 - -2.6
699,377 + -2.2
699,379 + -0.8
699,389 - -1.2
699,409 - -0.8
699,409 + -0.6
699,423 - -0.1
699,423 - 2.1
699,425 - -2.7
699,432 - -0.4
699,449 - -0.1
699,473 + -0.8
699,475 + -0.7
699,476 - -0.8
699,487 + -0.7
699,487 - 1.4
699,502 + -0.5
699,504 + -2.5
699,519 - 2.2
699,520 - -0.3
699,531 - -0.3
699,533 - -0.2
699,534 + 0.5
699,669 + -1.2
699,671 + -0.8
699,677 + -1.0
699,684 + -2.9
699,691 + -0.0
699,698 + -3.1
699,828 + -3.2
699,831 - -2.7
699,831 - -2.6
699,834 - -0.4