Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1225

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1224: 9592 - BLAST catalytic [Ascochyta rabiei], at 690092 to 691295 9592 mRNA_1225: 9593 - KOG2195 Transferrin receptor and related proteins containing the protease-associated (PA) domain, at 691442 to 693362 9593 mRNA_1226: 9594 - K01262 pepP Xaa-Pro aminopeptidase, at 693784 to 696236 9594

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
690,457 + 9592 mRNA_1224 0.30 -1.6
690,466 - 9592 mRNA_1224 0.31 -1.0
690,594 - 9592 mRNA_1224 0.42 -2.2
690,760 - 9592 mRNA_1224 0.55 -3.5
691,480 + -1.3
691,775 - 9593 mRNA_1225 0.17 -0.1
691,821 - 9593 mRNA_1225 0.20 -3.3
692,070 + 9593 mRNA_1225 0.33 -2.3
692,201 - 9593 mRNA_1225 0.40 -0.2
692,337 + 9593 mRNA_1225 0.47 -1.7
692,478 - 9593 mRNA_1225 0.54 -1.6
692,502 - 9593 mRNA_1225 0.55 -3.5
692,766 - 9593 mRNA_1225 0.69 -1.7
693,224 + -2.8
693,390 + -1.9
693,395 - 0.1
693,521 - -0.3
693,523 + -1.3
693,587 + -3.8
693,710 + -0.6
693,815 - -1.7
694,254 - 9594 mRNA_1226 0.19 -1.0
694,281 + 9594 mRNA_1226 0.20 -1.2
694,346 + 9594 mRNA_1226 0.23 -2.2