Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1193
Experiments: 40 hrs No Buoyancy Separation
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).
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Per-strain Table
| Position | Strand | Gene | Sysname | Fraction | 40 hrs No Buoyancy Separation |
|---|---|---|---|---|---|
| remove | |||||
| 617,921 | - | 9560 | mRNA_1192 | 0.76 | -2.5 |
| 617,953 | + | 9560 | mRNA_1192 | 0.77 | -0.4 |
| 618,052 | + | 9560 | mRNA_1192 | 0.82 | -0.9 |
| 618,052 | - | 9560 | mRNA_1192 | 0.82 | -0.3 |
| 618,192 | - | 9560 | mRNA_1192 | 0.89 | -2.2 |
| 618,229 | - | -2.7 | |||
| 618,229 | + | -1.6 | |||
| 618,244 | + | -1.7 | |||
| 618,371 | + | -1.6 | |||
| 618,381 | + | -2.2 | |||
| 618,405 | + | -2.2 | |||
| 618,416 | - | -2.9 | |||
| 618,417 | + | -0.2 | |||
| 618,418 | + | -3.7 | |||
| 618,418 | + | -0.4 | |||
| 618,418 | + | -4.2 | |||
| 618,418 | + | -2.8 | |||
| 618,418 | + | -3.6 | |||
| 618,419 | + | -2.3 | |||
| 618,419 | + | -2.5 | |||
| 618,425 | + | -1.0 | |||
| 618,530 | + | -0.8 | |||
| 618,536 | + | -2.3 | |||
| 618,576 | + | -1.5 | |||
| 618,627 | - | -0.4 | |||
| 618,638 | - | -0.1 | |||
| 618,641 | - | -0.8 | |||
| 618,667 | + | -1.9 | |||
| 618,681 | - | -3.1 | |||
| 618,710 | + | -0.8 | |||
| 618,713 | - | 0.2 | |||
| 618,773 | + | -4.6 | |||
| 618,931 | - | 9561 | mRNA_1193 | 0.10 | -2.0 |
| 619,053 | + | 9561 | mRNA_1193 | 0.16 | -2.4 |
| 619,270 | + | 9561 | mRNA_1193 | 0.27 | -1.7 |
| 619,427 | - | 9561 | mRNA_1193 | 0.35 | -0.4 |
| 619,428 | - | 9561 | mRNA_1193 | 0.35 | 0.5 |
| 619,663 | - | 9561 | mRNA_1193 | 0.47 | -4.6 |
| 619,993 | - | 9561 | mRNA_1193 | 0.64 | -1.4 |
| 620,167 | - | 9561 | mRNA_1193 | 0.73 | 0.4 |
| 620,190 | + | 9561 | mRNA_1193 | 0.74 | -1.9 |
| 620,190 | + | 9561 | mRNA_1193 | 0.74 | -0.8 |
| 620,191 | - | 9561 | mRNA_1193 | 0.74 | -2.4 |
| 620,254 | - | 9561 | mRNA_1193 | 0.77 | -1.2 |
| 620,450 | - | 9561 | mRNA_1193 | 0.87 | -3.5 |
| 620,542 | + | -2.0 | |||
| 620,584 | - | 0.8 | |||
| 620,724 | - | -1.4 | |||
| 620,875 | + | 0.5 | |||
| 620,885 | + | -2.4 | |||
| 621,036 | + | 0.4 | |||
| 621,055 | - | 0.3 | |||
| 621,057 | + | -1.5 | |||
| 621,163 | - | -1.2 | |||
| 621,192 | + | -1.2 | |||
| 621,305 | + | -0.9 | |||
| 621,397 | + | -1.2 | |||
| 621,398 | + | -2.4 | |||
| 621,695 | - | 9562 | mRNA_1194 | 0.22 | -3.8 |