Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1154

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1153: 9521 - K13513 LCLAT1, AGPAT8 lysocardiolipin and lysophospholipid acyltransferase, at 524550 to 526104 9521 mRNA_1154: 9522 - Hypothetical Protein, at 526597 to 527643 9522 mRNA_1155: 9523 - ProSiteProfiles-CBS domain profile.-PS51371,SUPERFAMILY--SSF54631, at 528482 to 529504 9523

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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525,743 + 9521 mRNA_1153 0.77 -3.1
525,769 + 9521 mRNA_1153 0.78 -2.1
526,021 - -0.8
526,177 + -0.5
526,446 + -1.3
526,479 - 0.5
526,481 + -0.0
526,508 + -2.7
526,509 - -2.2
526,605 - -1.0
526,761 + 9522 mRNA_1154 0.16 -1.0
526,771 + 9522 mRNA_1154 0.17 -1.2
526,941 - 9522 mRNA_1154 0.33 -2.3
526,952 + 9522 mRNA_1154 0.34 -3.5
526,954 - 9522 mRNA_1154 0.34 -3.7
527,218 + 9522 mRNA_1154 0.59 -0.8
527,551 - -1.6
527,656 + -1.6
528,215 - -0.4
528,373 - -0.0
528,439 - -0.8
528,537 + -3.0