Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1153

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1152: 9520 - KOG0069 Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily), at 523077 to 524441 9520 mRNA_1153: 9521 - K13513 LCLAT1, AGPAT8 lysocardiolipin and lysophospholipid acyltransferase, at 524550 to 526104 9521 mRNA_1154: 9522 - Hypothetical Protein, at 526597 to 527643 9522

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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523,628 - 9520 mRNA_1152 0.40 -0.2
523,844 + 9520 mRNA_1152 0.56 -3.3
523,894 - 9520 mRNA_1152 0.60 -0.3
524,045 - 9520 mRNA_1152 0.71 -3.0
524,148 - 9520 mRNA_1152 0.78 -3.3
524,178 - 9520 mRNA_1152 0.81 -2.1
524,639 - 0.5
524,833 + 9521 mRNA_1153 0.18 -0.9
525,743 + 9521 mRNA_1153 0.77 -3.1
525,769 + 9521 mRNA_1153 0.78 -2.1
526,021 - -0.8
526,177 + -0.5
526,446 + -1.3
526,479 - 0.5
526,481 + -0.0
526,508 + -2.7
526,509 - -2.2
526,605 - -1.0
526,761 + 9522 mRNA_1154 0.16 -1.0
526,771 + 9522 mRNA_1154 0.17 -1.2
526,941 - 9522 mRNA_1154 0.33 -2.3
526,952 + 9522 mRNA_1154 0.34 -3.5
526,954 - 9522 mRNA_1154 0.34 -3.7