Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1116

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1115: 9483 - SUPERFAMILY--SSF52047, at 439344 to 441081 9483 mRNA_1116: 9484 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 441335 to 443528 9484 mRNA_1117: 9485 - K13102 KIN DNA/RNA-binding protein KIN17, at 443661 to 444962 9485

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
440,360 - 9483 mRNA_1115 0.58 -1.8
440,362 - 9483 mRNA_1115 0.59 -2.7
440,387 + 9483 mRNA_1115 0.60 -0.7
440,577 + 9483 mRNA_1115 0.71 -1.3
440,616 + 9483 mRNA_1115 0.73 0.2
440,750 - 9483 mRNA_1115 0.81 -1.5
440,777 + 9483 mRNA_1115 0.82 -2.2
440,944 - -4.1
441,080 + -2.3
441,088 - -2.9
441,179 - -1.2
441,233 + -1.1
441,339 + -2.3
441,359 - -0.1
441,360 - -0.6
441,396 - -0.3
441,488 + -1.6
441,511 - -2.5
441,568 + 9484 mRNA_1116 0.11 -2.1
441,569 - 9484 mRNA_1116 0.11 -1.0
441,576 - 9484 mRNA_1116 0.11 -0.8
441,662 - 9484 mRNA_1116 0.15 -1.5
441,668 + 9484 mRNA_1116 0.15 -2.1
442,104 - 9484 mRNA_1116 0.35 -1.3
442,122 - 9484 mRNA_1116 0.36 -0.2
442,151 + 9484 mRNA_1116 0.37 -0.6
442,238 + 9484 mRNA_1116 0.41 -1.2
442,317 + 9484 mRNA_1116 0.45 -0.8
442,439 - 9484 mRNA_1116 0.50 -1.1
442,808 + 9484 mRNA_1116 0.67 1.0
442,844 - 9484 mRNA_1116 0.69 -1.3
442,859 + 9484 mRNA_1116 0.69 -1.5
443,179 + 9484 mRNA_1116 0.84 -2.1
443,282 - 9484 mRNA_1116 0.89 -0.3
443,442 + -1.3
443,565 - -0.8
443,576 - -2.6