Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1098

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1097: 9465 - Hypothetical Protein, at 399144 to 399987 9465 mRNA_1098: 9466 - Hypothetical Protein, at 400435 to 400998 9466 mRNA_1099: 9467 - K08515 VAMP7 vesicle-associated membrane protein 7, at 401360 to 402298 9467

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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399,445 - 9465 mRNA_1097 0.36 -0.1
399,762 + 9465 mRNA_1097 0.73 -4.2
399,861 + 9465 mRNA_1097 0.85 -0.1
399,868 - 9465 mRNA_1097 0.86 -1.8
400,339 + -3.3
400,535 + 9466 mRNA_1098 0.18 -1.1
400,656 - 9466 mRNA_1098 0.39 -0.7
400,657 + 9466 mRNA_1098 0.39 -1.2
400,822 + 9466 mRNA_1098 0.69 -1.9
400,947 + 1.1
401,091 - -1.0
401,112 + -3.1
401,123 - -1.1
401,126 - -0.9
401,130 + -0.9
401,252 - -1.9
401,283 - 0.4
401,300 + -1.6
401,537 + 9467 mRNA_1099 0.19 -0.5
401,551 + 9467 mRNA_1099 0.20 -1.7
401,577 - 9467 mRNA_1099 0.23 -3.3