Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1095

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1094: 9462 - HMMPfam-Frag1/DRAM/Sfk1 family-PF10277, at 393718 to 395326 9462 mRNA_1095: 9463 - KOG2741 Dimeric dihydrodiol dehydrogenase, at 395816 to 397150 9463 mRNA_1096: 9464 - KOG1611 Predicted short chain-type dehydrogenase, at 397231 to 398090 9464

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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395,065 + 9462 mRNA_1094 0.84 -2.5
395,211 - -2.1
395,247 + -0.8
395,314 - -0.8
395,344 + -1.9
395,473 + 0.9
395,657 - 0.1
395,815 - -1.2
395,823 + -1.2
396,101 + 9463 mRNA_1095 0.21 0.1
396,114 + 9463 mRNA_1095 0.22 -2.3
396,539 - 9463 mRNA_1095 0.54 -0.7
396,955 - 9463 mRNA_1095 0.85 -1.2
397,100 + -1.6
397,134 - -0.8
397,290 + -0.2
397,510 - 9464 mRNA_1096 0.32 -0.2
397,788 + 9464 mRNA_1096 0.65 1.0
397,992 + 9464 mRNA_1096 0.88 -0.7