Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1092

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1091: 9459 - Hypothetical Protein, at 386691 to 388371 9459 mRNA_1092: 9460 - SUPERFAMILY--SSF52833, at 388491 to 389761 9460 mRNA_1093: 9461 - K08734 MLH1 DNA mismatch repair protein MLH1, at 389832 to 392680 9461

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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387,736 + 9459 mRNA_1091 0.62 0.3
387,900 + 9459 mRNA_1091 0.72 -2.2
387,996 - 9459 mRNA_1091 0.78 -1.0
388,001 - 9459 mRNA_1091 0.78 0.9
388,003 - 9459 mRNA_1091 0.78 -2.6
388,008 + 9459 mRNA_1091 0.78 -0.6
388,012 - 9459 mRNA_1091 0.79 -0.0
388,466 - -1.4
388,768 + 9460 mRNA_1092 0.22 -0.6
388,880 - 9460 mRNA_1092 0.31 -1.9
388,904 + 9460 mRNA_1092 0.32 -0.8
388,931 - 9460 mRNA_1092 0.35 -1.2
389,031 - 9460 mRNA_1092 0.42 -0.4
389,094 - 9460 mRNA_1092 0.47 -1.3
389,183 - 9460 mRNA_1092 0.54 -1.5
389,218 + 9460 mRNA_1092 0.57 -0.8
389,218 + 9460 mRNA_1092 0.57 -0.7
389,242 - 9460 mRNA_1092 0.59 -4.5
389,295 - 9460 mRNA_1092 0.63 -2.8
389,333 - 9460 mRNA_1092 0.66 -2.7
389,897 - -0.9
390,079 + -1.4
390,215 - 9461 mRNA_1093 0.13 -3.6
390,324 - 9461 mRNA_1093 0.17 -0.2
390,344 + 9461 mRNA_1093 0.18 -0.6
390,548 - 9461 mRNA_1093 0.25 -0.4
390,621 - 9461 mRNA_1093 0.28 -1.9
390,624 - 9461 mRNA_1093 0.28 -2.3
390,648 + 9461 mRNA_1093 0.29 -3.6