Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1048

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1047: 9415 - K19054 FXN frataxin, at 272188 to 272699 9415 mRNA_1048: 9416 - KOG1812 Predicted E3 ubiquitin ligase, at 272884 to 273999 9416 mRNA_1049: 9417 - K12878 THOC1 THO complex subunit 1, at 274076 to 276723 9417

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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273,098 - 9416 mRNA_1048 0.19 -2.9
273,139 + 9416 mRNA_1048 0.23 -2.2
273,140 + 9416 mRNA_1048 0.23 -0.4
273,260 + 9416 mRNA_1048 0.34 -0.4
273,263 - 9416 mRNA_1048 0.34 -1.8
273,528 + 9416 mRNA_1048 0.58 -1.0
273,534 + 9416 mRNA_1048 0.58 -2.1
273,809 + 9416 mRNA_1048 0.83 -0.2
273,833 - 9416 mRNA_1048 0.85 -1.4
274,158 + -1.6
274,396 + 9417 mRNA_1049 0.12 -1.0