Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_998

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_997: 9365 - K08735 MSH2 DNA mismatch repair protein MSH2, at 164007 to 168056 9365 mRNA_998: 9366 - Hypothetical Protein, at 168302 to 169013 9366 mRNA_999: 9367 - HMMPfam-PAPA-1-like conserved region-PF04795, at 169197 to 171213 9367

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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167,457 - 9365 mRNA_997 0.85 -1.7
167,457 + 9365 mRNA_997 0.85 -1.7
167,633 - 9365 mRNA_997 0.90 -1.8
167,749 - -2.3
167,874 - -1.9
167,887 + -2.3
167,909 - -1.7
168,020 + -1.0
168,057 + -3.9
168,072 + -2.4
168,086 + -0.8
168,514 - 9366 mRNA_998 0.30 -1.1
168,644 + 9366 mRNA_998 0.48 -1.4
168,669 - 9366 mRNA_998 0.52 -1.2
169,094 - -0.7
169,254 + -1.0
169,859 - 9367 mRNA_999 0.33 -1.2