Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_966

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_965: 9333 - Hypothetical Protein, at 90078 to 91448 9333 mRNA_966: 9334 - BLAST probable GUS1-Glutamyl-tRNA synthetase [Ustilago hordei], at 92031 to 92569 9334

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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91,225 - 9333 mRNA_965 0.84 -3.1
91,326 + -1.0
91,357 + -0.2
91,371 + 0.6
91,468 + -0.7
91,468 + -1.3
91,469 - -2.6
91,614 - -1.2
91,615 - -0.5
91,617 + -2.0
91,642 + -2.1
91,650 - -3.9
91,805 - -1.8
91,816 + -1.3
91,951 + -2.4
91,953 + -3.4
91,970 - -1.1
91,974 - -1.2
91,988 + 1.6
92,075 - -1.4
92,116 + 9334 mRNA_966 0.16 -2.6
92,210 + 9334 mRNA_966 0.33 -1.6
92,386 + 9334 mRNA_966 0.66 0.6
92,412 + 9334 mRNA_966 0.71 -0.1
92,413 + 9334 mRNA_966 0.71 0.4
92,570 + -1.8
92,667 + -2.6
92,680 + 1.3
92,688 + -0.2
92,821 - -1.8
93,158 + -0.7
93,234 - -3.4
93,279 - -1.4
93,293 + -1.6
93,298 + -0.2
93,399 + -1.8
93,450 - -0.4
93,563 + 0.0