Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_963

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_962: 9330 - Hypothetical Protein, at 82973 to 83563 9330 mRNA_963: 9331 - K15109 SLC25A20_29, CACT, CACL, CRC1 solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29, at 84124 to 85910 9331 mRNA_964: 9332 - Hypothetical Protein, at 86721 to 89416 9332

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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83,202 + 9330 mRNA_962 0.39 -3.1
83,218 + 9330 mRNA_962 0.41 -0.0
83,218 - 9330 mRNA_962 0.41 -1.6
83,225 + 9330 mRNA_962 0.43 -1.9
83,225 + 9330 mRNA_962 0.43 -0.5
83,373 + 9330 mRNA_962 0.68 -3.1
83,388 + 9330 mRNA_962 0.70 0.3
83,394 + 9330 mRNA_962 0.71 -2.9
83,506 - -0.8
83,515 - -1.7
83,659 + -0.8
83,676 + -2.4
83,678 - -0.6
83,685 + -2.1
83,731 + -0.2
83,733 - -0.7
83,738 + -2.0
83,738 - -1.8
83,741 + -2.3
83,746 - -1.2
83,753 - -3.1
83,753 - -1.4
83,769 + 0.4
83,769 - 0.8
83,769 - 0.1
83,772 - -0.0
83,776 + -2.2
83,806 - -0.7
83,814 + -2.2
83,814 - -1.3
83,818 - -0.6
83,833 + -1.5
83,846 + -0.9
83,857 - -1.6
83,865 + -1.0
83,878 + -2.9
83,948 + -0.9
83,968 + -3.4
84,094 + 0.0
84,110 - -0.7
84,118 - -0.7
84,832 + 9331 mRNA_963 0.40 0.3
85,271 + 9331 mRNA_963 0.64 -2.4
85,392 + 9331 mRNA_963 0.71 -1.0
85,857 - -1.6
85,974 - -0.6
85,975 + -0.7
85,986 + -1.3
85,991 - -3.7
86,007 + -2.6
86,013 + -1.0
86,013 + -0.3
86,019 + -1.4
86,022 + -1.9
86,073 - -0.9
86,083 - -1.8
86,089 - -0.4
86,090 + -1.9
86,094 + -0.0
86,095 + -0.2
86,097 + -1.0
86,104 - 0.0
86,108 + -0.5
86,119 + -0.4
86,124 - -4.2
86,130 + -0.6
86,132 + 2.5
86,133 + -2.3
86,138 - -1.5
86,140 - -1.7
86,266 + 0.2
86,420 + 1.9
86,477 + -2.9
86,595 + 1.9
86,661 + -0.5
86,881 + 0.6