Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_960

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_959: 9327 - Hypothetical Protein, at 73133 to 74885 9327 mRNA_960: 9328 - K20409 WDR59 WD repeat-containing protein 59, at 75504 to 80689 9328 mRNA_961: 9329 - Hypothetical Protein, at 81243 to 82808 9329

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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74,515 - 9327 mRNA_959 0.79 -0.3
74,797 - -0.1
74,805 - -2.6
74,832 + -2.2
74,833 + -0.7
74,836 + 0.1
74,966 + -0.2
74,985 - -0.2
75,097 - -2.8
75,098 - -1.2
75,108 - -0.5
75,113 - 0.9
75,131 - 1.3
75,142 + -0.0
75,144 - -1.2
75,249 - -3.2
75,290 + -0.6
75,435 - -1.1
75,441 - -2.8
75,457 + -2.4
75,562 - -2.1
75,579 + -2.5
75,699 + -2.7
75,857 - -2.7
76,559 - 9328 mRNA_960 0.20 -0.0
76,714 - 9328 mRNA_960 0.23 -0.7
76,971 + 9328 mRNA_960 0.28 -2.4
77,154 - 9328 mRNA_960 0.32 0.3
77,175 - 9328 mRNA_960 0.32 -2.3
77,183 - 9328 mRNA_960 0.32 -1.2
77,207 + 9328 mRNA_960 0.33 -1.9
78,199 - 9328 mRNA_960 0.52 -3.5
78,203 + 9328 mRNA_960 0.52 -0.4
78,472 + 9328 mRNA_960 0.57 -0.1
78,777 + 9328 mRNA_960 0.63 -1.7
79,148 + 9328 mRNA_960 0.70 -0.7
79,205 + 9328 mRNA_960 0.71 -1.0
79,222 + 9328 mRNA_960 0.72 -0.6
79,261 + 9328 mRNA_960 0.72 0.6
79,396 + 9328 mRNA_960 0.75 1.3
79,516 + 9328 mRNA_960 0.77 -0.7
79,804 - 9328 mRNA_960 0.83 0.9
79,949 - 9328 mRNA_960 0.86 -1.3
80,116 + 9328 mRNA_960 0.89 -1.9
80,290 - -1.3
80,363 - -0.9
80,404 - -0.3
80,427 - -1.5
80,547 + -1.0
80,822 - -4.0
80,984 - -1.8
80,999 + 2.2
81,080 + -0.2