Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_956

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_955: 9323 - Hypothetical Protein, at 58639 to 63739 9323 mRNA_956: 9324 - KOG2466 Uridine permease/thiamine transporter/allantoin transport, at 64037 to 66119 9324 mRNA_957: 9325 - K07160 K07160 UPF0271 protein, at 67059 to 67959 9325

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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63,059 + 9323 mRNA_955 0.87 -2.0
63,068 - 9323 mRNA_955 0.87 -3.4
63,206 - 9323 mRNA_955 0.90 0.2
63,260 + -1.4
63,474 + -0.2
63,856 - -1.5
64,193 + -0.3
64,227 - -1.0
64,494 + 9324 mRNA_956 0.22 -2.8
64,958 + 9324 mRNA_956 0.44 -1.2
64,964 + 9324 mRNA_956 0.45 -0.7
65,317 - 9324 mRNA_956 0.61 -1.6
65,494 + 9324 mRNA_956 0.70 -0.9
65,686 - 9324 mRNA_956 0.79 -0.6
65,904 - 9324 mRNA_956 0.90 -3.2
65,921 + -1.3
65,995 - -0.9
66,238 + 1.8
66,268 + -2.1
66,282 - -0.1
66,323 + -2.5
66,333 - -1.8
66,359 - 1.5
66,367 + 1.1
66,375 - -0.6
66,382 + -3.8
66,418 - -1.3
66,676 - -0.9
66,676 + -3.9
66,693 + -0.2
66,701 - -0.9
66,812 + -1.2
66,836 + 0.6
66,842 - -2.2
66,891 + 0.8
66,892 - -1.9
66,962 - -0.8
66,972 + -0.6
67,008 + -2.9