Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_903

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_902: 9270 - KOG2398 Predicted proline-serine-threonine phosphatase-interacting protein (PSTPIP), at 2151634 to 2155672 9270 mRNA_903: 9271 - Hypothetical Protein, at 2155958 to 2156725 9271

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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2,155,485 + -2.5
2,155,681 - -1.1
2,155,769 - -0.5
2,155,914 + -2.4
2,156,047 - 9271 mRNA_903 0.12 -2.3
2,156,089 + 9271 mRNA_903 0.17 0.3
2,156,117 + 9271 mRNA_903 0.21 0.5
2,156,356 - 9271 mRNA_903 0.52 -0.6
2,156,375 + 9271 mRNA_903 0.54 -1.1
2,156,678 - 1.3
2,156,802 - 0.3
2,156,921 - -1.1
2,156,924 + -1.7
2,156,941 + -2.1
2,156,957 - -1.7
2,157,098 - -1.5
2,157,210 + -1.2
2,157,231 + -2.3
2,157,273 + 0.5
2,157,311 + 1.1
2,157,357 - -0.6
2,157,379 - -3.3
2,157,391 - -1.3
2,157,392 + -0.9
2,157,397 - -1.9
2,157,400 - 0.8
2,157,423 + 0.2
2,157,450 - -0.9
2,157,523 + -2.3
2,157,542 + -1.5
2,157,553 + -2.9
2,157,590 - -1.8
2,157,681 - -1.2