Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_851

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_850: 9218 - SUPERFAMILY--SSF52047, at 2036866 to 2038448 9218 mRNA_851: 9219 - HMMPfam-Lipase (class 3)-PF01764,SUPERFAMILY--SSF53474, at 2039418 to 2042658 9219 mRNA_852: 9220 - K01923 purC phosphoribosylaminoimidazole-succinocarboxamide synthase, at 2042732 to 2043876 9220

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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2,038,474 - -1.6
2,038,575 - -1.1
2,038,713 - -0.8
2,038,769 - -0.8
2,038,892 + -2.6
2,039,048 - 0.3
2,039,198 - 0.1
2,039,464 - -2.3
2,039,593 - -3.9
2,040,161 + 9219 mRNA_851 0.23 -1.9
2,040,167 - 9219 mRNA_851 0.23 -2.6
2,040,769 + 9219 mRNA_851 0.42 -1.3
2,040,809 - 9219 mRNA_851 0.43 -2.7
2,041,261 - 9219 mRNA_851 0.57 0.1
2,041,498 + 9219 mRNA_851 0.64 -1.6
2,041,658 + 9219 mRNA_851 0.69 -2.2
2,041,758 - 9219 mRNA_851 0.72 -1.3
2,041,973 + 9219 mRNA_851 0.79 -2.9
2,042,352 - -3.9
2,042,473 + -0.3
2,042,543 + -2.2
2,042,665 - 0.0