Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_820

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_819: 9187 - KOG1810 Cell cycle-associated protein, at 1953151 to 1958497 9187 mRNA_820: 9188 - K20495 CYP704B1 long-chain fatty acid omega-monooxygenase, at 1958610 to 1960839 9188 mRNA_821: 9189 - K14301 NUP107, NUP84 nuclear pore complex protein Nup107, at 1961565 to 1964829 9189

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,957,610 - 9187 mRNA_819 0.83 -1.7
1,957,706 + 9187 mRNA_819 0.85 0.9
1,957,709 - 9187 mRNA_819 0.85 -0.0
1,957,793 + 9187 mRNA_819 0.87 -0.9
1,957,808 - 9187 mRNA_819 0.87 -0.7
1,957,914 - 9187 mRNA_819 0.89 -2.4
1,957,978 + -0.4
1,958,369 - -2.9
1,958,517 - -0.5
1,958,816 + -1.6
1,958,920 + 9188 mRNA_820 0.14 -2.9
1,959,238 + 9188 mRNA_820 0.28 -0.5
1,959,238 + 9188 mRNA_820 0.28 0.9
1,959,638 + 9188 mRNA_820 0.46 0.3
1,959,970 - 9188 mRNA_820 0.61 -1.8
1,959,972 + 9188 mRNA_820 0.61 -2.2
1,960,326 + 9188 mRNA_820 0.77 -2.7
1,961,048 + -2.0
1,961,070 - -0.4
1,961,150 - 0.4
1,961,173 + -1.3
1,961,177 + -1.2
1,961,183 + 0.0
1,961,195 + -1.7
1,961,215 - -0.3
1,961,344 + -3.2
1,961,452 - 0.6
1,961,457 - -2.4
1,961,465 + -1.4
1,961,465 - -3.8
1,961,490 - -1.5