Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_757

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_756: 9124 - HMMPfam-Protein of unknown function (DUF3074)-PF11274,SUPERFAMILY--SSF55961, at 1802998 to 1803902 9124 mRNA_757: 9125 - K01493 comEB dCMP deaminase, at 1804262 to 1807266 9125 mRNA_758: 9126 - K20404 DEPDC5 DEP domain-containing protein 5, at 1807319 to 1813069 9126

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,803,618 + 9124 mRNA_756 0.69 0.9
1,803,638 + 9124 mRNA_756 0.71 -0.3
1,803,727 + 9124 mRNA_756 0.81 -1.0
1,803,756 + 9124 mRNA_756 0.84 -2.5
1,803,880 + -1.9
1,803,914 + -1.5
1,803,927 + -0.6
1,803,928 + -1.6
1,803,944 + -4.0
1,804,037 - -0.8
1,804,210 - -0.7
1,804,362 - -0.8
1,804,495 - -0.3
1,804,694 + 9125 mRNA_757 0.14 -1.2
1,804,742 + 9125 mRNA_757 0.16 -1.4
1,805,104 - 9125 mRNA_757 0.28 -2.3
1,805,110 + 9125 mRNA_757 0.28 -2.5
1,805,359 - 9125 mRNA_757 0.37 -2.7
1,805,417 + 9125 mRNA_757 0.38 -0.8
1,805,647 - 9125 mRNA_757 0.46 -1.5
1,805,664 + 9125 mRNA_757 0.47 -2.4
1,805,805 + 9125 mRNA_757 0.51 0.2
1,805,805 - 9125 mRNA_757 0.51 -3.0
1,805,834 + 9125 mRNA_757 0.52 -2.1
1,805,956 - 9125 mRNA_757 0.56 -0.7
1,805,981 + 9125 mRNA_757 0.57 -1.8
1,806,100 - 9125 mRNA_757 0.61 -2.4
1,806,440 + 9125 mRNA_757 0.72 -0.2
1,806,770 - 9125 mRNA_757 0.83 -1.6
1,807,142 - -1.5
1,807,169 + -0.5
1,807,317 - -0.4
1,807,392 + -2.6
1,808,184 + 9126 mRNA_758 0.15 1.1